Univ.-Prof. Dr. Gerhard Herndl
All Publications
Showing entries 1 - 20 out of 312
2024
Fadeev, E, Hennenfeind, JH, Amano, C, Zhao, Z, Klun, K, Herndl, GJ & Tinta, T 2024, 'Bacterial degradation of ctenophore Mnemiopsis leidyi organic matter', mSystems, vol. 9, no. 2, e01264-23. https://doi.org/10.1128/msystems.01264-23
Salazar-Alekseyeva, K, Herndl, GJ & Baltar, F 2024, 'Influence of Salinity on the Extracellular Enzymatic Activities of Marine Pelagic Fungi', Journal of Fungi, vol. 10, no. 2, 152. https://doi.org/10.3390/jof10020152
Orel, N, Fadeev, E, Herndl, GJ, Turk, V & Tinta, T 2024, 'Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii', BMC Genomics, vol. 25, no. 1, 146. https://doi.org/10.1186/s12864-024-10062-2
Zhao, Z, Baltar, F & Herndl, GJ 2024, 'Decoupling between the genetic potential and the metabolic regulation and expression in microbial organic matter cleavage across microbiomes', Microbiology Spectrum, pp. e0303623. https://doi.org/10.1128/spectrum.03036-23
Masdeu-Navarro, M, Mangot, JF, Xue, L, Cabrera-Brufau, M, Kieber, DJ, Rodríguez-Ros, P, Gardner, SG, Bergauer, K, Herndl, GJ, Marrasé, C & Simó, R 2024, 'Diel variation of seawater volatile organic compounds, DMSP-related compounds, and microbial plankton inside and outside a tropical coral reef ecosystem', Frontiers in Marine Science , vol. 11, 1341619. https://doi.org/10.3389/fmars.2024.1341619
Jiao, N, Luo, T, Chen, Q, Zhao, Z, Xiao, X, Liu, J, Jian, Z, Xie, S, Thomas, H, Herndl, GJ, Benner, R, Gonsior, M, Chen, F, Cai, W-J & Robinson, C 2024, 'The microbial carbon pump and climate change', Nature Reviews. Microbiology. https://doi.org/10.1038/s41579-024-01018-0
2023
Tang, W, Ward, BB, Beman, M, Bristow, L, Clark, D, Fawcett, S, Frey, C, Fripiat, F, Herndl, GJ, Mdutyana, M, Paulot, F, Peng, X, Santoro, AE, Shiozaki, T, Sintes, E, Stock, C, Sun, X, Wan, XS, Xu, MN & Zhang, Y 2023, 'Database of nitrification and nitrifiers in the global ocean', Earth System Science Data, vol. 15, no. 11, pp. 5036-5077. https://doi.org/10.5194/essd-15-5039-2023
Srivastava, A, De Corte, D, Garcia, JAL, Swan, BK, Stepanauskas, R, Herndl, GJ & Sintes, E 2023, 'Interplay between autotrophic and heterotrophic prokaryotic metabolism in the bathypelagic realm revealed by metatranscriptomic analyses', Microbiome, vol. 11, no. 1, 239. https://doi.org/10.1186/s40168-023-01688-7
Debeljak, P, Bayer, B, Sun, Y, Herndl, GJ & Obernosterer, I 2023, 'Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean', Microbiome, vol. 11, no. 1, 187. https://doi.org/10.1186/s40168-023-01600-3
Tinta, T, Zhao, Z, Bayer, B & Herndl, GJ 2023, 'Jellyfish detritus supports niche partitioning and metabolic interactions among pelagic marine bacteria', Microbiome, vol. 11, no. 1, 156, pp. 156. https://doi.org/10.1186/s40168-023-01598-8
Baltar, F, Martínez-Pérez, C, Amano, C, Vial, M, Robaina-Estévez, S, Reinthaler, T, Herndl, GJ, Zhao, Z, Logares, R, Morales, SE & González, JM 2023, 'A ubiquitous gammaproteobacterial clade dominates expression of sulfur oxidation genes across the mesopelagic ocean', Nature Microbiology, vol. 8, no. 6, pp. 1137-1148. https://doi.org/10.1038/s41564-023-01374-2
Herndl, GJ, Bayer, B, Baltar, F & Reinthaler, T 2023, 'Prokaryotic Life in the Deep Ocean's Water Column', Annual review of marine science, vol. 15, 1, pp. 461-483. https://doi.org/10.1146/annurev-marine-032122-115655
Fadeev, E, Carpaneto Bastos, C, Hennenfeind, JH, Biller, SJ, Sher, D, Wietz, M & Herndl, GJ 2023, 'Characterization of membrane vesicles in
Alteromonas macleodii indicates potential roles in their copiotrophic lifestyle.', Microlife, vol. 4, uqac025. https://doi.org/10.1093/femsml/uqac025
Salazar-Alekseyeva, K, Herndl, GJ & Baltar, F 2023, 'Release of cell-free enzymes by marine pelagic fungal strains', Frontiers in Fungal Biology, vol. 4, 1209265. https://doi.org/10.3389/ffunb.2023.1209265
2022
Munson-McGee, JH, Lindsay, MR, Sintes, E, Brown, JM, D'Angelo, T, Brown, J, Lubelczyk, LC, Tomko, P, Emerson, D, Orcutt, BN, Poulton, NJ, Herndl, GJ & Stepanauskas, R 2022, 'Decoupling of respiration rates and abundance in marine prokaryoplankton', Nature, vol. 612, no. 7941, pp. 764-770. https://doi.org/10.1038/s41586-022-05505-3
Amano, C, Reinthaler, T, Sintes, E, Varela, MM, Stefanschitz, J, Kaneko, S, Nakano, Y, Borchert, W, Herndl, GJ & Utsumi, M 2022, 'A device for assessing microbial activity under ambient hydrostatic pressure: The in situ microbial incubator (ISMI)', Limnology and Oceanography: Methods, vol. 21, no. 2, pp. 69-81. https://doi.org/10.1002/lom3.10528
Amano, C, Zhao, Z, Sintes, E, Reinthaler, T, Stefanschitz, J, Kisadur, M, Utsumi, M & Herndl, GJ 2022, 'Limited carbon cycling due to high-pressure effects on the deep-sea microbiome', Nature Geoscience, vol. 15, no. 12, pp. 1041-1047. https://doi.org/10.1038/s41561-022-01081-3
Korlević, M, Markovski, M, Herndl, GJ & Najdek, M 2022, 'Temporal variation in the prokaryotic community of a nearshore marine environment', Scientific Reports, vol. 12, no. 1, 16859. https://doi.org/10.1038/s41598-022-20954-6
Conte, MH, Pedrosa Pàmies, R, Honda, M & Herndl, GJ 2022, 'Editorial: The oceanic particle flux and its cycling within the deep water column', Frontiers in Earth Science, vol. 10, 1020065. https://doi.org/10.3389/feart.2022.1020065
Markovski, M, Najdek, M, Herndl, GJ & Korlevic, M 2022, 'Compositional stability of sediment microbial communities during a seagrass meadow decline', Frontiers in Marine Science , vol. 9, 966070. https://doi.org/10.3389/fmars.2022.966070