Univ.-Prof. Dr. Gerhard Herndl
All Publications
Showing entries 1 - 20 out of 327
2026
Chen, S, Xie, ZX, Yan, KQ, Chen, JW, Kong, LF, Li, DX, Wu, PF, Peng, L, Lin, L, Zhao, Z, Fan, GY, Liu, SQ, Herndl, GJ & Wang, DZ 2026, 'Integrated meta-omics reveals organic matter processing by bacteria in the dark ocean', Innovation Geoscience, vol. 4, no. 1, 100184. https://doi.org/10.59717/j.xinn-geo.2026.100184
Heitger, M, Amano, C, Reinthaler, T, Papadatou, M, Pokorny, L, Alvarez-Salgado, XA & Herndl, GJ 2026, 'Major contribution of particle-associated microbes to deep-sea organic carbon degradation', Limnology and Oceanography, vol. 71, no. 1, e70310. https://doi.org/10.1002/lno.70310
2025
Orel, N, Fadeev, E, Celussi, M, Turk, V, Klun, K, Afjehi-Sadat, L, Herndl, GJ & Tinta, T 2025, 'Down the drain: exploring wastewater's role in coastal microbiome transformations', Microbiome, vol. 14, no. 1, 46. https://doi.org/10.1186/s40168-025-02298-1
Markovski, M, Najdek, M, Zhao, Z, Herndl, GJ & Korlević, M 2025, 'Shift in the metabolic profile of sediment microbial communities during seagrass decline', Environmental Microbiome, vol. 20, no. 1, pp. 93. https://doi.org/10.1186/s40793-025-00750-1
Masdeu-Navarro, M, Cabrera-Brufau, M, Xue, L, Rodríguez-Ros, P, Gardner, SG, Bergauer, K, Posman, KM, Archer, SD, Herndl, GJ, Marrasé, C, Kieber, DJ & Simó, R 2025, 'The seascape of VOC production and cycling in a tropical coral reef', Elementa, vol. 13, no. 1, 00014. https://doi.org/10.1525/elementa.2025.00014
Hou, L, Zhao, Z, Steger-Mähnert, B, Jiao, N, Herndl, GJ & Zhang, Y 2025, 'Microbial metabolism in laboratory reared marine snow as revealed by a multi-omics approach', Microbiome, vol. 13, no. 1, 114, pp. 114. https://doi.org/10.1186/s40168-025-02097-8
Elena, AX, Orel, N, Fang, P, Herndl, GJ, Berendonk, TU, Tinta, T & Klümper, U 2025, 'Jellyfish blooms-an overlooked hotspot and potential vector for the transmission of antimicrobial resistance in marine environments', mSystems, vol. 10, no. 3, e0101224. https://doi.org/10.1128/msystems.01012-24
Engel, A, Pontiller, B, Becker, KW, Amano, C, Zhao, Z, Herndl, GJ & Lee, C 2025, 'Microbial diagenesis of dissolved organic matter from the ocean's surface to abyssal depths: a case study in the Humboldt upwelling system', Frontiers in Microbiology, vol. 16, 1677097. https://doi.org/10.3389/fmicb.2025.1677097
Pedrosa-Pamies, R, Conte, MH, Honda, M & Herndl, GJ 2025, 'The oceanic particle flux and its cycling within the deep water column, volume II, Editorial', Frontiers in Earth Science, vol. 13, 1716510. https://doi.org/10.3389/feart.2025.1716510
2024
Saito, MA, Saunders, JK, McIlvin, MR, Bertrand, EM, Breier, JA, Brisbin, MM, Colston, SM, Compton, JR, Griffin, TJ, Hervey, WJ, Hettich, RL, Jagtap, PD, Janech, M, Johnson, R, Keil, R, Kleikamp, H, Leary, D, Martens, L, McCain, JSP, Moore, E, Mehta, S, Moran, DM, Neibauer, J, Neely, BA, Jakuba, MV, Johnson, J, Duffy, M, Herndl, GJ, Giannone, R, Mueller, R, Nunn, BL, Pabst, M, Peters, S, Rajczewski, A, Rowland, E, Searle, B, Van Den Bossche, T, Vora, GJ, Waldbauer, JR, Zheng, H & Zhao, Z 2024, 'Results from a multi-laboratory ocean metaproteomic intercomparison effects of LC-MS acquisition and data analysis procedures', Biogeosciences, vol. 21, no. 21, pp. 4889-4908. https://doi.org/10.5194/bg-21-4889-2024
Amaral, V, Forja, J, Steger-Mähnert, B, Herndl, GJ & Romera-Castillo, C 2024, 'Spatial distribution of dissolved free amino acids in three Iberian Atlantic estuaries', Marine Chemistry, vol. 267, 104456. https://doi.org/10.1016/j.marchem.2024.104456
Strniša, F, Tinta, T, Herndl, GJ & Kosec, G 2024, 'Dynamic population modeling of bacterioplankton community response to gelatinous marine zooplankton bloom collapse and its impact on marine nutrient balance', Progress in Oceanography, vol. 227, 103312. https://doi.org/10.1016/j.pocean.2024.103312
Heneghan, RF, Holloway-Brown, J, Gasol, JM, Herndl, GJ, Morán, XAG & Galbraith, ED 2024, 'The global distribution and climate resilience of marine heterotrophic prokaryotes', Nature Communications, vol. 15, 6943, pp. 1-11. https://doi.org/10.1038/s41467-024-50635-z
Zhao, Z, Amano, C, Reinthaler, T, Baltar, F, Orellana, MV & Herndl, GJ 2024, 'Metaproteomic analysis decodes trophic interactions of microorganisms in the dark ocean', Nature Communications, vol. 15, no. 1, 6411, pp. 6411. https://doi.org/10.1038/s41467-024-50867-z
Jiao, N, Luo, T, Chen, Q, Zhao, Z, Xiao, X, Liu, J, Jian, Z, Xie, S, Thomas, H, Herndl, GJ, Benner, R, Gonsior, M, Chen, F, Cai, W-J & Robinson, C 2024, 'The microbial carbon pump and climate change', Nature Reviews. Microbiology, vol. 22, no. 7, pp. 408-419. https://doi.org/10.1038/s41579-024-01018-0
Chen, S, Xie, Z-X, Yan, K-Q, Chen, J-W, Li, D-X, Wu, P-F, Peng, L, Lin, L, Dong, C-M, Zhao, Z, Fan, G-Y, Liu, S-Q, Herndl, GJ & Wang, D-Z 2024, 'Functional vertical connectivity of microbial communities in the ocean', Science Advances, vol. 10, no. 21, adj8184. https://doi.org/10.1126/sciadv.adj8184
Zhao, Z, Baltar, F & Herndl, GJ 2024, 'Decoupling between the genetic potential and the metabolic regulation and expression in microbial organic matter cleavage across microbiomes', Microbiology Spectrum, vol. 12, no. 5, e0303623. https://doi.org/10.1128/spectrum.03036-23
Zhao, Z, Amano, C, Reinthaler, T, Orellana, MV & Herndl, GJ 2024, 'Substrate uptake patterns shape niche separation in marine prokaryotic microbiome', Science Advances, vol. 10, no. 20, eadn5143. https://doi.org/10.1126/sciadv.adn5143
Fadeev, E, Hennenfeind, JH, Amano, C, Zhao, Z, Klun, K, Herndl, GJ & Tinta, T 2024, 'Bacterial degradation of ctenophore Mnemiopsis leidyi organic matter', mSystems, vol. 9, no. 2, e01264-23. https://doi.org/10.1128/msystems.01264-23
Salazar-Alekseyeva, K, Herndl, GJ & Baltar, F 2024, 'Influence of Salinity on the Extracellular Enzymatic Activities of Marine Pelagic Fungi', Journal of Fungi, vol. 10, no. 2, 152. https://doi.org/10.3390/jof10020152